FingerprintUtils.VariantContextSet (picard 2.18.2 API)

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Summary:
Nested |
Field |
Constr |
Method

Detail:
Field |
Constr |
Method

java.lang.Object
- java.util.AbstractCollection<E>
- - java.util.AbstractSet<E>
  - - java.util.TreeSet<htsjdk.variant.variantcontext.VariantContext>
    - - picard.fingerprint.FingerprintUtils.VariantContextSet

All Implemented Interfaces:

Serializable, Cloneable, Iterable<htsjdk.variant.variantcontext.VariantContext>, Collection<htsjdk.variant.variantcontext.VariantContext>, NavigableSet<htsjdk.variant.variantcontext.VariantContext>, Set<htsjdk.variant.variantcontext.VariantContext>, SortedSet<htsjdk.variant.variantcontext.VariantContext>

Enclosing class:

FingerprintUtils
```
public static class FingerprintUtils.VariantContextSet
extends TreeSet<htsjdk.variant.variantcontext.VariantContext>
```
A class that holds VariantContexts sorted by genomic position

See Also:

Serialized Form

- Method Summary
  - Methods inherited from class java.util.AbstractCollection
    containsAll, retainAll, toArray, toArray, toString
  - Methods inherited from class java.util.AbstractSet
    equals, hashCode, removeAll
  - Methods inherited from interface java.util.Collection
    parallelStream, removeIf, stream
  - Methods inherited from interface java.lang.Iterable
    forEach
  - Methods inherited from class java.lang.Object
    finalize, getClass, notify, notifyAll, wait, wait, wait
  - Methods inherited from interface java.util.Set
    containsAll, equals, hashCode, removeAll, retainAll, toArray, toArray
  - Methods inherited from class java.util.TreeSet
    add, addAll, ceiling, clear, clone, comparator, contains, descendingIterator, descendingSet, first, floor, headSet, headSet, higher, isEmpty, iterator, last, lower, pollFirst, pollLast, remove, size, spliterator, subSet, subSet, tailSet, tailSet

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Summary:
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