picard.illumina

Classes

• CheckIlluminaDirectory
• ClusterDataToSamConverter
• CollectIlluminaBasecallingMetrics
• CollectIlluminaLaneMetrics
• CollectIlluminaLaneMetrics.IlluminaLaneMetricsCollector
• ExtractIlluminaBarcodes
• ExtractIlluminaBarcodes.BarcodeMetric
• ExtractIlluminaBarcodes.PerTileBarcodeExtractor
• ExtractIlluminaBarcodes.PerTileBarcodeExtractor.BarcodeMatch
• IlluminaBasecallingMetrics
• IlluminaBasecallsConverter
• IlluminaBasecallsToFastq
• IlluminaBasecallsToSam
• IlluminaLaneMetrics
• IlluminaPhasingMetrics
• LanePhasingMetricsCollector
• MarkIlluminaAdapters
• NewIlluminaBasecallsConverter

Enums

• IlluminaBasecallsToFastq.ReadNameFormat