htsjdk.samtools.util.CloseableIterator<AbstractIlluminaPositionFileReader.PositionInfo>, Closeable, AutoCloseable, Iterator<AbstractIlluminaPositionFileReader.PositionInfo>public class PosFileReader extends AbstractIlluminaPositionFileReader
AbstractIlluminaPositionFileReader.PositionInfoMAX_POS, MIN_POS, S_LOCS_FILE| Constructor | Description |
|---|---|
PosFileReader(File posFile) |
| Modifier and Type | Method | Description |
|---|---|---|
void |
close() |
|
boolean |
hasNext() |
Return true if the file has more elements to return, false otherwise
|
protected String |
makeExceptionMsg() |
Create a string that will be included in any NoSuchElementException thrown by the next() method
|
protected AbstractIlluminaPositionFileReader.PositionInfo |
unsafeNextInfo() |
Read a line of text and parse it into two float values, create a PositionInfo and return it
|
getFile, getLane, getTile, next, removeforEachRemainingpublic PosFileReader(File posFile)
protected AbstractIlluminaPositionFileReader.PositionInfo unsafeNextInfo()
unsafeNextInfo in class AbstractIlluminaPositionFileReaderprotected String makeExceptionMsg()
AbstractIlluminaPositionFileReadermakeExceptionMsg in class AbstractIlluminaPositionFileReaderpublic boolean hasNext()
AbstractIlluminaPositionFileReaderhasNext in interface Iterator<AbstractIlluminaPositionFileReader.PositionInfo>hasNext in class AbstractIlluminaPositionFileReaderpublic void close()