SamRecordWithOrdinalAndSetDuplicateReadFlag (picard 2.18.2 API)

java.lang.Object
- htsjdk.samtools.util.SamRecordWithOrdinal
- - picard.sam.markduplicates.util.SamRecordWithOrdinalAndSetDuplicateReadFlag

public class SamRecordWithOrdinalAndSetDuplicateReadFlag
extends htsjdk.samtools.util.SamRecordWithOrdinal

This class sets the duplicate read flag as the result state when examining sets of records.

Constructor Summary

Constructors
Constructor	Description
`SamRecordWithOrdinalAndSetDuplicateReadFlag()`
`SamRecordWithOrdinalAndSetDuplicateReadFlag(htsjdk.samtools.SAMRecord record, long recordIndex)`

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type Method Description

void setResultState(boolean resultState)
- Methods inherited from class java.lang.Object
  clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
- Methods inherited from class htsjdk.samtools.util.SamRecordWithOrdinal
  getRecord, getRecordOrdinal, setRecord, setRecordOrdinal

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`void`	`setResultState(boolean resultState)`

Constructor Detail

SamRecordWithOrdinalAndSetDuplicateReadFlag

public SamRecordWithOrdinalAndSetDuplicateReadFlag()

SamRecordWithOrdinalAndSetDuplicateReadFlag

public SamRecordWithOrdinalAndSetDuplicateReadFlag(htsjdk.samtools.SAMRecord record,
                                                   long recordIndex)

Method Detail
- setResultState
```
public void setResultState(boolean resultState)
```
  Specified by:
  
  setResultState in class htsjdk.samtools.util.SamRecordWithOrdinal

Class SamRecordWithOrdinalAndSetDuplicateReadFlag

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Methods inherited from class htsjdk.samtools.util.SamRecordWithOrdinal

Constructor Detail

SamRecordWithOrdinalAndSetDuplicateReadFlag

SamRecordWithOrdinalAndSetDuplicateReadFlag

Method Detail

setResultState