CountingInputStream (htsjdk 2.14.3 API)

java.lang.Object
- java.io.InputStream
- - htsjdk.samtools.cram.io.CountingInputStream

All Implemented Interfaces:

Closeable, AutoCloseable
```
public class CountingInputStream
extends InputStream
```
An input stream that counts the bytes read from it.

Constructor Summary

Constructors
Constructor Description

CountingInputStream(InputStream inputStream)

Constructors
Constructor	Description
`CountingInputStream(InputStream inputStream)`

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`int`	`available()`
`void`	`close()`
`long`	`getCount()`
`void`	`mark(int readLimit)`
`boolean`	`markSupported()`
`int`	`read()`
`int`	`read(byte[] b)`
`int`	`read(byte[] b, int off, int length)`
`void`	`reset()`
`long`	`skip(long n)`

Methods inherited from class java.io.InputStream
readAllBytes, readNBytes, transferTo

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Constructor Detail
  - CountingInputStream
```
public CountingInputStream(InputStream inputStream)
```
- Method Detail
  - read
```
public int read()
         throws IOException
```
    Specified by:
    
    read in class InputStream
    
    Throws:
    
    IOException
  - read
```
public int read(byte[] b)
         throws IOException
```
    Overrides:
    
    read in class InputStream
    
    Throws:
    
    IOException
  - read
```
public int read(byte[] b,
                int off,
                int length)
         throws IOException
```
    Overrides:
    
    read in class InputStream
    
    Throws:
    
    IOException
  - skip
```
public long skip(long n)
          throws IOException
```
    Overrides:
    
    skip in class InputStream
    
    Throws:
    
    IOException
  - available
```
public int available()
              throws IOException
```
    Overrides:
    
    available in class InputStream
    
    Throws:
    
    IOException
  - close
```
public void close()
           throws IOException
```
    Specified by:
    
    close in interface AutoCloseable
    
    Specified by:
    
    close in interface Closeable
    
    Overrides:
    
    close in class InputStream
    
    Throws:
    
    IOException
  - mark
```
public void mark(int readLimit)
```
    Overrides:
    
    mark in class InputStream
  - reset
```
public void reset()
           throws IOException
```
    Overrides:
    
    reset in class InputStream
    
    Throws:
    
    IOException
  - markSupported
```
public boolean markSupported()
```
    Overrides:
    
    markSupported in class InputStream
  - getCount
```
public long getCount()
```

Class CountingInputStream

Constructor Summary

Method Summary

Methods inherited from class java.io.InputStream

Methods inherited from class java.lang.Object

Constructor Detail

CountingInputStream

Method Detail

read

read

read

skip

available

close

mark

reset

markSupported

getCount