public class ReferenceCache extends Object
| Constructor | Description |
|---|---|
ReferenceCache(ngs.ReadCollection run,
SAMFileHeader virtualHeader) |
| Modifier and Type | Method | Description |
|---|---|---|
ngs.Reference |
get(int referenceIndex) |
This method returns Reference objects by reference indexes in SAM header
Those objects do not maintain thread safety
|
public ReferenceCache(ngs.ReadCollection run,
SAMFileHeader virtualHeader)