public class TabixUtils extends Object
| Modifier and Type | Class | Description |
|---|---|---|
static class |
TabixUtils.TIndex |
|
static class |
TabixUtils.TIntv |
|
static class |
TabixUtils.TPair64 |
| Modifier and Type | Field | Description |
|---|---|---|
static String |
STANDARD_INDEX_EXTENSION |
| Constructor | Description |
|---|---|
TabixUtils() |
| Modifier and Type | Method | Description |
|---|---|---|
static SAMSequenceDictionary |
getSequenceDictionary(File tabixIndex) |
Generates the SAMSequenceDictionary from the given tabix index file
|
static boolean |
less64(long u,
long v) |
public static final String STANDARD_INDEX_EXTENSION
public static boolean less64(long u,
long v)
public static SAMSequenceDictionary getSequenceDictionary(File tabixIndex)
tabixIndex - the tabix index file