Field Detail

• containerByteSize

  public int containerByteSize

  Byte size of the content excluding header.

• sequenceId

  public int sequenceId

• alignmentStart

  public int alignmentStart

• alignmentSpan

  public int alignmentSpan

• nofRecords

  public int nofRecords

• globalRecordCounter

  public long globalRecordCounter

• bases

  public long bases

• blockCount

  public int blockCount

• landmarks

  public int[] landmarks

• checksum

  public int checksum

• blocks

  public Block[] blocks

  Container data

• header

  public CompressionHeader header

• slices

  public Slice[] slices

• buildHeaderTime

  public long buildHeaderTime

• buildSlicesTime

  public long buildSlicesTime

• writeTime

  public long writeTime

• parseTime

  public long parseTime

• readTime

  public long readTime

• offset

  public long offset

  Container start in the stream.

Constructor Detail

• Container

  public Container()

Method Detail

• toString

  public String toString()

  Overrides:

  toString in class Object

• isEOF

  public boolean isEOF()